1. Blue stripes along the iso-pH-lines occur after staining and destaining Cause: The Ampholytes thet are creating the pH-gradients are also “Amin-Carbon-Acides” and though strongly stainable with Coomassie. See below. Remedy: Usa longer washing steps after the TCA and/or a higher alcohol concentration to get rid of it. See this page: bluelines
2. Lipophylic Proteins were not stained (at all) Cause: After the separation and the fixation lipophilic proteins can get native again even after the gel swam 20 minutes in 20% TCA! Remedy: See this page: Lipoproteins
TS case #1: Stripes along the iso-pH-lines.Normally in the neutral and/or the acidic region (in this case left side)...
...a very hard case
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